Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015836286.1_cds_XP_016506258.1_19504
CDS Infomation

[gene=LOC107824054] [db_xref=GeneID:107824054] [protein=putative amidase C869.01] [protein_id=XP_016506258.1] [location=complement(join(42127..42480,42550..42748,42951..43193,43280..43494,43605..43922,44003..44221))] [gbkey=CDS]
Sequence

ATGAACGTTTATTCCTTGTTTGCATTACTTACTCTAACGGCCTTATCACTTTTGGGATGG
TCGCAAATTGATACCTGCCATGCATTCTCGATCAAAGAAGCTAGCATTAGTGATCTTCAG
CTTGCTTTTAACCAAAACCATCTTACGTCGAGGCAGCTGGTCAAGTTCTACCTAGGAGAA
ATTTCACGTCTTAATCCAGTTCTTAAAGCTGTTATAGAGATAAATCCCGATGCACTCTTG
GAAGCTGAGAAGGCTGACAATGAGAGGAACGAGGCAATTAGGAAGTCATGTTCTTTATCC
ATGTTGCATGGTATTCCAATACTTCTTAAGGATAATATAGCAACAAAAGATAAGCTTAAC
ACAACTGCTGGATCTTTTTCATTACTGGGATCAGTAGTGCCGTGTGACGCAGGTGTAGTG
ACAAAGTTGAGAAAAGCAGGGGCAATTGTACTAGGCAAAGCTAGCCTTAGTGAGTGGGCT
CATTCTAGGGCGCTAACGGCACCCAATGGCTGGAGTCCCAGAGGTGGACAAGGAAAGAAT
CCTTACGTTCTCTCAGCAGACCCTTGTAGCTCGAGTAGCGGATCAGCAATATCAGTGGCA
GCAAACATGGTATCTGTGTCAATAGGGACAGAGACCCGTGGTTCCATTATATGCCCCGCC
AGCTCTAATGCAGTTATAGGCATCAAACCAACCGTTGGTCTCACTAGCCGAGCTGGGGTC
ATCCCAGTCACTCCCAGACAAGACTCCGTTGGGCCAATTGCCAGAACTATAGCGGATTCT
GTTCATGTTCTTGATGTAATTGTAGGCTTTGACCACAATGACGCGACTGCAACTCGTGCA
GCAGAAAAATTAATCCCTCCTGGTGGTTATACTCGATTTCTGAAAGTAGATGGTCTTAAG
GGTAAGAGATTGGGAATAGTGAGGGAACCCTTCTTCAATTTCACAAATAATCCTGCTTTG
GCTCAAGCTTTTGAGAAACATCTCCAAACACTCAGGCGACAAGGTGCAGTCTTGGTAGAT
AATGTGAACATAGTGAACCTTGAGACAATTTTAGACTTTAATCTGAGCGGTGAAGCATCG
GCAGTATTGGCTGAAATGAAGATAGCCTTAAATGCTTATCTACAGGAGCTAGTTGATTCC
CCTGTTCGATCTTTAGCAGATATAATAATCTTCAATCAGAAAAATTCTGAACTGGAAATG
CTCAAGGAATTTGGTCAAGATATATTTTTGGCAGCTGAAGCAACAAATGGAATTGGGGAA
ACAGAATTGAAAGCTTTGAGGAATTTATTAAGATTAACAAAAGATGGATTCCAAAAGTTG
ATGAAAAAGTATAAGTTGGATGCATTGGTAACTGCTGGTTCTGGTATTGCTGCTGTTGTT
GCAATTGGTGGATTTCCAGCAATTAGTGTGCCTGCTGCATATGACAAAGAGGTGCCTATT
GGCATTTGTTTTAGTGGGTTGAAAGGGTCTGAGCCTAAATTAATTGAAATTGCCTATGGC
TTTGAGCAAGCAACCCTGATTAGAAAATCTCCTACATTTTTACCTTGA

Peptide Sequence

PEP ID

XP_016506258.1
PEP Infomation

PREDICTED: putative amidase C869.01 [Nicotiana tabacum]
Sequence

MNVYSLFALLTLTALSLLGWSQIDTCHAFSIKEASISDLQLAFNQNHLTSRQLVKFYLGE
ISRLNPVLKAVIEINPDALLEAEKADNERNEAIRKSCSLSMLHGIPILLKDNIATKDKLN
TTAGSFSLLGSVVPCDAGVVTKLRKAGAIVLGKASLSEWAHSRALTAPNGWSPRGGQGKN
PYVLSADPCSSSSGSAISVAANMVSVSIGTETRGSIICPASSNAVIGIKPTVGLTSRAGV
IPVTPRQDSVGPIARTIADSVHVLDVIVGFDHNDATATRAAEKLIPPGGYTRFLKVDGLK
GKRLGIVREPFFNFTNNPALAQAFEKHLQTLRRQGAVLVDNVNIVNLETILDFNLSGEAS
AVLAEMKIALNAYLQELVDSPVRSLADIIIFNQKNSELEMLKEFGQDIFLAAEATNGIGE
TELKALRNLLRLTKDGFQKLMKKYKLDALVTAGSGIAAVVAIGGFPAISVPAAYDKEVPI
GICFSGLKGSEPKLIEIAYGFEQATLIRKSPTFLP

Transcript Sequence

Gene sequence data has not been registered.